The Best Private Villas near National Museum of Nature and Science
Travel Guide | September 2025
A list by Eva Schulz & Kim Moore. Updated September 2025.
This is our list with the best private villas near National Museum of Nature and Science, Tokyo. Hope you enjoy it. Tip: Set your dates to see room prices!
Opened April 2024. In the heart of Tokyo, set within a short distance of Ryukoku-ji Temple and The Shitaya Shrine, 17 JR上野駅3分钟 13人房 5LDK 110平别墅丨Ueno Villa 3 minutes from Ueno Station 13 people offers free WiFi, air conditioning and household amenities such as a fridge and kettle. This recently renovated villa is located 400 metres from Hoon-ji Temple and 400 metres from Seigyo-ji Temple. The property is non-smoking and is located 500 metres from Rinko-ji Temple.
The villa with a terrace and city views features 5 bedrooms, a living room, a TV, an equipped kitchen with a dishwasher and a microwave, and 1 bathroom with a bath. The villa offers bed linen, towels and laundry service.
Popular points of interest near the villa include Atre Ueno Shopping Mall, Front gate of Honobo In Kanei-ji Temple and Ecute Ueno Shopping Mall. Tokyo Haneda Airport is 28 km away, and the property offers a paid airport shuttle service.Show full description
Opened September 2024. Situated 200 metres from Akiba Shrine and 300 metres from Sogenji Temple in the centre of Tokyo, Ueno Yuyuhouse 1LDK for rent, Close to Senso-ji Temple, Kaminarimon Gate, Kappabashi Dougu Street, Akihabara,Shinjuku and Disneyland features accommodation with free WiFi and free private parking. This holiday home provides accommodation with a balcony. The property is close to popular attractions like Chosho-ji Temple, Seigyo-ji Temple and Kappabashi-dori Shopping Street.
The 1-bedroom holiday home features a living room with a flat-screen TV with streaming services, a fully equipped kitchen with a microwave and a fridge, and 1 bathroom with bathrobes. The air-conditioned unit at the property features a bidet and a dressing room.
Popular points of interest near the holiday home include Ryukoku-ji Temple, Rinko-ji Temple and Hoon-ji Temple. Tokyo Haneda Airport is 28 km from the property.Show full description
Newly opened, April 2025. Arashi hotel 嵐ホテル is situated in the Taito district of Tokyo, 200 metres from Calligraphy Museum, 300 metres from Nippori South Park and 700 metres from Kanei-ji Temple. It is located 200 metres from Shikian and provides luggage storage space. Providing free WiFi throughout the property, the non-smoking villa features a hot tub.
The villa is equipped with 3 bedrooms, 1 bathroom, bed linen, towels, a flat-screen TV with streaming services, a dining area, a fully equipped kitchen, and a terrace with quiet street views. For added privacy, the accommodation has a private entrance and soundproofing.
Popular points of interest near the villa include Kanei-ji Temple Kompon Chudo, Kemmyo-in Temple and Tokugawa Ietsuna's Mausoleum Gate Plaque. The air-conditioned unit at the property features a hot tub and a dressing room. Tokyo Haneda Airport is 29 km away.Show full description
Newly opened, April 2025. 新筑Jr山手線鶯谷徒步3分直达上野 秋叶原 新宿 涩谷 池袋 原宿 银座 成田机场独栋四层110平别墅 features a terrace and is located in Tokyo, within just 200 metres of Calligraphy Museum and 300 metres of Nippori South Park. Guests staying at this villa have access to a balcony. Free WiFi is available throughout the property and Shikian is 200 metres away.
The air-conditioned villa consists of 3 bedrooms, a living room, a fully equipped kitchen with a dishwasher and a kettle, and 1 bathroom with a hot tub and slippers. This villa is non-smoking and soundproof.
Popular points of interest near the villa include Kanei-ji Temple, Kanei-ji Temple Kompon Chudo and Kemmyo-in Temple. The unit at the property features a bidet and a dressing room. Tokyo Haneda Airport is 29 km away.Show full description
In the Taito district of Tokyo, close to Tokaku-ji Temple, YADOYA Ueno-Rikyu features free WiFi and a washing machine. The property is around 500 metres from Rinko-ji Temple, 600 metres from Seigyo-ji Temple and 700 metres from Matsuba Park. The property is 100 metres from The Shitaya Shrine, and within 6 km of the city centre.
The air-conditioned holiday home consists of 4 bedrooms, a living room, a fully equipped kitchen with a microwave and a kettle, and 1 bathroom with a hot tub and slippers. Towels and bed linen are featured in the holiday home. The accommodation is non-smoking.
Popular points of interest near the holiday home include Ryukoku-ji Temple, Choen-ji Temple and Hoon-ji Temple. Tokyo Haneda Airport is 22 km away.Show full description
Newly opened, October 2025. Situated in Tokyo, a few steps from Calligraphy Museum and a few steps from Shikian, nestay villa tokyo nippori offers air conditioning. The property is located 1.1 km from Tokugawa Tsunayoshi Mausoleum Imperial Scroll Gate, 700 metres from Tombstone of Tokugawa Yoshinobu and 700 metres from Tenno-ji Temple Gojuno Tower Remains. The property is non-smoking and is set 300 metres from Nippori South Park.
With free WiFi, this 2-bedroom villa features a flat-screen TV and a kitchen with a microwave and fridge. For added convenience, the property can provide towels and linens for a supplement.
Popular points of interest near the villa include Kanei-ji Temple, Kanei-ji Temple Kompon Chudo and Tokugawa Ietsuna's Mausoleum Gate Plaque. Tokyo Haneda Airport is 30 km from the property.Show full description
Opened May 2024. Situated in Tokyo, 300 metres from Sogenji Temple, 600 metres from Kappabashi-dori Shopping Street and 300 metres from Kinryu Park, 包棟3房別墅 直達上野2分 可住8人 適合團體家庭旅遊 features accommodation with a terrace and free WiFi. The property was built in 2024 and has accommodation with a balcony. The property is 200 metres from Akiba Shrine, and within 6.8 km of the city centre.
The air-conditioned villa consists of 3 bedrooms, a living room, a fully equipped kitchen with a microwave and a kettle, and 1 bathroom with a bidet and slippers. For added privacy, the accommodation features a private entrance.
Popular points of interest near the villa include Rinko-ji Temple, Chosho-ji Temple and Seigyo-ji Temple. A flat-screen TV is available. Tokyo Haneda Airport is 29 km from the property, and the property offers a paid airport shuttle service.Show full description
Set in Tokyo, 500 metres from Calligraphy Museum and 500 metres from Nippori South Park, YADOYA Negishi offers air conditioning. The property is close to Tokugawa Ietsuna's Mausoleum Gate Plaque, Chosho-ji Temple and Tokyo National Museum The Heiseikan. Free WiFi is available throughout the property and Shikian is 500 metres away.
The 1-bedroom holiday home comes with a living room with a flat-screen TV, a fully equipped kitchen with a microwave and a fridge, and 1 bathroom with a hair dryer. Towels and bed linen are featured in the holiday home. For added privacy, the accommodation features a private entrance.
Popular points of interest near the holiday home include Kanei-ji Temple, Kanei-ji Temple Kompon Chudo and Kemmyo-in Temple. Tokyo Haneda Airport is 23 km away.Show full description
Opened October 2023. Featuring quiet street views, Tokyo Ueno Inaricho Villa 130sqm 6LDK 3 Baths offers accommodation with a terrace, around 100 metres from Tokaku-ji Temple. Among the facilities at this property are a shared kitchen and full-day security, along with free WiFi throughout the property. The property is non-smoking and is set 400 metres from The Shitaya Shrine.
The air-conditioned villa consists of 6 bedrooms, a living room, a fully equipped kitchen with a microwave and a kettle, and 3 bathrooms with a bidet and slippers. Laundry service is also available.
Guests can also relax in the shared lounge area.
Popular points of interest near the villa include Choen-ji Temple, Rinko-ji Temple and Ryukoku-ji Temple. Tokyo Haneda Airport is 22 km away, and the property offers a paid airport shuttle service.Show full description
In the Taito district of Tokyo, close to Sogenji Temple, YADOYA Matsugaya has free WiFi and a washing machine. This property is situated a short distance from attractions such as Rinko-ji Temple, Seigyo-ji Temple, and Hoon-ji Temple. The property is 6.8 km from the city centre and 200 metres from Akiba Shrine.
The air-conditioned holiday home consists of 1 bedroom, a living room, a fully equipped kitchen with a microwave, and 1 bathroom with a bath and a hair dryer. Towels and bed linen are offered in the holiday home. For added privacy, the accommodation features a private entrance.
Popular points of interest near the holiday home include Chosho-ji Temple, Kappabashi-dori Shopping Street and Kinryu Park. Tokyo Haneda Airport is 23 km from the property.Show full description
In a central area of Tokyo, located within a short distance of Kappabashi-dori Shopping Street and Sogenji Temple, Asakusa,2BR Cozy Detached House,10mins to Sensō-ji offers free WiFi, air conditioning and household amenities such as a fridge and kettle. The property was built in 2020 and features accommodation with a balcony. The holiday home has a sun terrace and a hot tub.
The holiday home comes with 2 bedrooms, a fully equipped kitchen with an oven and a microwave, and 1 bathroom with a hot tub, slippers and a washing machine. Towels and bed linen are featured in the holiday home. The holiday home is allergy-free and soundproof.
Popular points of interest near Asakusa,2BR Cozy Detached House,10mins to Sensō-ji include Rinko-ji Temple, Matsuba Park and Drum Museum. Tokyo Haneda Airport is 23 km away.Show full description
Newly opened, October 2025. Located in Tokyo, 500 metres from Kinryu Park and 700 metres from Chosho-ji Temple, Yadoya Asakusa Asagao offers air conditioning. The property is close to several well-known attractions, less than 1 km from Ichiyo Memorial Museum, a 13-minute walk from Asakusa ROX Shopping Center and less than 1 km from Seigyo-ji Temple. Free WiFi is available throughout the property and Akiba Shrine is 500 metres away.
The holiday home features 2 bedrooms, a flat-screen TV, a fully equipped kitchen with a microwave and a fridge, a washing machine, and 1 bathroom with a bidet. Towels and bed linen are provided in the holiday home. For added privacy, the accommodation features a private entrance.
Popular points of interest near the holiday home include Kappabashi-dori Shopping Street, Sogenji Temple and Edo Taito Traditional Crafts Center. Tokyo Haneda Airport is 26 km away.Show full description
Newly opened, June 2025. Located in Tokyo, less than 1 km from Chosho-ji Temple and a 10-minute walk from Akiba Shrine, Iriya House 上野 浅草すぐの一軒家貸切ステイ provides air-conditioned accommodation with a balcony and free WiFi. This recently renovated holiday home is located 700 metres from Ichiyo Memorial Museum and less than 1 km from Kinryu Park. The property is non-smoking and is situated less than 1 km from Sogenji Temple.
The 3-bedroom holiday home comes with a living room with a flat-screen TV with streaming services, a fully equipped kitchen with a microwave and a fridge, and 1 bathroom with slippers. The property offers quiet street views.
Popular points of interest near the holiday home include Asakusa Fujiasama Shrine, Kappabashi-dori Shopping Street and Kemmyo-in Temple. Tokyo Haneda Airport is 29 km away.Show full description
Opened May 2024. Situated within the Taito district in Tokyo, Ichinagi Private Family Villa Near Nippori with Easy Access to Narita and Asakusa has air conditioning, a balcony, and quiet street views. Among the facilities at this property are a 24-hour front desk and full-day security, along with free WiFi throughout the property. Guests can request massage treatments.
The villa has 3 bedrooms, 1 bathroom, bed linen, towels, a flat-screen TV with streaming services, a dining area, a fully equipped kitchen, and a terrace with garden views. The property has an outdoor dining area.
Guests can relax in the garden at the property.
Popular points of interest near the villa include Tenno-ji Temple Gojuno Tower Remains, The Site of Koda Rohan House and Tennoji Temple. Tokyo Haneda Airport is 30 km from the property.Show full description
Yanaka Kotobuki Sou is situated in the Taito district of Tokyo, 700 metres from Kyoouji Temple, 500 metres from Daimyo Clock Museum and 700 metres from The Site of Koda Rohan House. The 2-star holiday home features quiet street views and is 600 metres from Asakura Museum of Sculpture. Free WiFi is available throughout the property and Mori Ōgai Memorial Museum is 500 metres away.
The holiday home has 1 bedroom, a flat-screen TV, a fully equipped kitchen with a microwave and a toaster, a washing machine, and 1 bathroom with a bidet. The air-conditioned unit at the property features a bath and a dressing room. For added privacy, the accommodation features a private entrance.
Popular points of interest near the holiday home include Tombstone of Tokugawa Yoshinobu, Tenno-ji Temple Gojuno Tower Remains and Tennoji Temple. Tokyo Haneda Airport is 24 km from the property.Show full description
Newly opened, April 2025. 近上野 3层全新别墅 全新装修 3室1厅1浴室2卫生间 设施齐全 最大8人 Ueno 3 rooms 1dining room 1 bathrooms 2toilets Max 8P has a balcony and is situated in Tokyo, within just 800 metres of Calligraphy Museum and less than 1 km of Nippori South Park. The property is close to several well-known attractions, 1.2 km from Kanei-ji Temple, 1.1 km from Ichiyo Memorial Museum and 1 km from Tokugawa Ietsuna's Mausoleum Gate Plaque. Free WiFi is available throughout the property and Shikian is 700 metres away.
The air-conditioned villa consists of 3 bedrooms, a living room, a fully equipped kitchen with a microwave and a kettle, and 1 bathroom with a hot tub and slippers. Towels and bed linen are available in the villa. For added privacy, the accommodation features a private entrance.
Popular points of interest near the villa include Chosho-ji Temple, Kemmyo-in Temple and Kissho-in Temple. Tokyo Haneda Airport is 29 km from the property.Show full description
YADOYA Iriyaan is set in the Taito district of Tokyo, 700 metres from Kappabashi-dori Shopping Street, 600 metres from Akiba Shrine and 700 metres from Sogenji Temple. The property is close to Ichiyo Memorial Museum, Seigyo-ji Temple and Hoon-ji Temple. Free WiFi is available throughout the property and Kinryu Park is 400 metres away.
The air-conditioned holiday home consists of 2 bedrooms, a living room, a fully equipped kitchen with a microwave and a kettle, and 1 bathroom with a bidet and slippers. Towels and bed linen are offered in the holiday home. The accommodation is non-smoking.
Popular points of interest near the holiday home include Edo Taito Traditional Crafts Center, Chosho-ji Temple and Asakusa ROX Shopping Center. Tokyo Haneda Airport is 23 km from the property.Show full description
Opened December 2024. Located in Tokyo, 700 metres from Kinryu Park and less than 1 km from Chosho-ji Temple, 藍-Ai-ASAKUSA offers air conditioning. It is situated less than 1 km from Asakusa Fujiasama Shrine and provides full-day security. Free WiFi is available throughout the property and Ichiyo Memorial Museum is 600 metres away.
The villa is equipped with 3 bedrooms, 2 bathrooms, bed linen, towels, a flat-screen TV with streaming services, a dining area, a fully equipped kitchen, and a terrace with quiet street views. For added privacy, the accommodation has a private entrance and soundproofing.
Popular points of interest near the villa include Kappabashi-dori Shopping Street, Edo Taito Traditional Crafts Center and Akiba Shrine. Tokyo Haneda Airport is 29 km away.Show full description
Newly opened, May 2025. Located in Tokyo, 600 metres from Akiba Shrine and 600 metres from Chosho-ji Temple, househotel上野 入谷 offers a terrace and air conditioning. Popular points of interest nearby include Edo Taito Traditional Crafts Center, Seigyo-ji Temple and Kemmyo-in Temple. The property is non-smoking and is situated 600 metres from Kinryu Park.
With free WiFi, this 1-bedroom holiday home provides a flat-screen TV, a washing machine and a fully equipped kitchenette with a microwave and fridge.
Popular points of interest near the holiday home include Sogenji Temple, Kappabashi-dori Shopping Street and Ichiyo Memorial Museum. Tokyo Haneda Airport is 29 km away.Show full description
Located in the centre of Tokyo, 500 metres from Ryukoku-ji Temple and 500 metres from Chosho-ji Temple, Tora Hotel Kitaueno - Vacation STAY 52747v offers free WiFi and air conditioning. Guests staying at this holiday home have access to a fully equipped kitchen. The property is non-smoking and is set 600 metres from Hoon-ji Temple.
Popular points of interest near the holiday home include Akiba Shrine, Seigyo-ji Temple and Front gate of Honobo In Kanei-ji Temple. Tokyo Haneda Airport is 22 km away.Show full description
We do our best to keep this list as up-to-date as possible. We last updated it in September 2025. If you know of a private villa that should be on the list, let us know. Click here to contact us. Thanks!